org.algernon.test
Class PharmGKBTest2

java.lang.Object
  org.algernon.test.PharmGKBTest2

public class PharmGKBTest2

extends Object

Tests basic execution functionality of Algernon. Does not test the compiler. Example:

 java  -classpath $HOME/projects:$ALGY/src:$PHARMGEN/lib/protege.jar org.algernon.test.BasicTest
 

See Also:

Algernon

Field Summary

protected Algernon	f_algy
protected AlgernonKB	f_drugkb
protected String	f_DrugProject
protected Jatha	f_lisp
protected AlgernonKB	f_meshkb
protected String	f_MeshProject
protected AlgernonKB	f_pharmgkb
protected String	f_pharmgkbProject
protected String	f_testFile

Constructor Summary

PharmGKBTest2()

Method Summary

void	init() Reads in the parameters and tries to open the KB.
static void	main(String[] args)
void	printRules()
void	start() Executes some small code snippets.
void	stop() Halts the program nicely.
void	testDrugVocabulary()
void	testMeSH()
void	testPharmGKB()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

f_algy

protected Algernon f_algy

f_lisp

protected Jatha f_lisp

f_pharmgkb

protected AlgernonKB f_pharmgkb

f_meshkb

protected AlgernonKB f_meshkb

f_drugkb

protected AlgernonKB f_drugkb

f_pharmgkbProject

protected String f_pharmgkbProject

f_MeshProject

protected String f_MeshProject

f_DrugProject

protected String f_DrugProject

f_testFile

protected String f_testFile

Constructor Detail

PharmGKBTest2

public PharmGKBTest2()

Method Detail

main

public static void main(String[] args)

init

public void init()

Reads in the parameters and tries to open the KB.

stop

public void stop()

Halts the program nicely.

printRules

public void printRules()

start

public void start()

Executes some small code snippets.

testPharmGKB

public void testPharmGKB()

testMeSH

public void testMeSH()

testDrugVocabulary

public void testDrugVocabulary()